Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.44■□□□□ 0.54
COL11A1P12107 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL11A1P12107 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.44■□□□□ 0.54
COL11A1P12107 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.44■□□□□ 0.54
COL11A1P12107 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.44■□□□□ 0.54
COL11A1P12107 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.44■□□□□ 0.54
COL11A1P12107 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
COL11A1P12107 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.43■□□□□ 0.54
COL11A1P12107 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.43■□□□□ 0.54
COL11A1P12107 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
COL11A1P12107 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
COL11A1P12107 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.43■□□□□ 0.54
COL11A1P12107 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 AC087499.6-201ENST00000411576 835 ntBASIC18.43■□□□□ 0.54
COL11A1P12107 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.43■□□□□ 0.54
COL11A1P12107 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.43■□□□□ 0.54
COL11A1P12107 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.43■□□□□ 0.54
COL11A1P12107 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
COL11A1P12107 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.43■□□□□ 0.54
COL11A1P12107 AC093726.1-201ENST00000608064 963 ntBASIC18.43■□□□□ 0.54
COL11A1P12107 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.43■□□□□ 0.54
COL11A1P12107 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
COL11A1P12107 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.43■□□□□ 0.54
COL11A1P12107 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.43■□□□□ 0.54
COL11A1P12107 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
COL11A1P12107 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
COL11A1P12107 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
COL11A1P12107 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
COL11A1P12107 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL11A1P12107 LINC01144-201ENST00000626198 1710 ntBASIC18.42■□□□□ 0.54
COL11A1P12107 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.42■□□□□ 0.54
COL11A1P12107 ARSEP1-201ENST00000420443 635 ntBASIC18.42■□□□□ 0.54
COL11A1P12107 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 POU5F1P6-201ENST00000466990 990 ntBASIC18.42■□□□□ 0.54
COL11A1P12107 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COL11A1P12107 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.42■□□□□ 0.54
COL11A1P12107 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL11A1P12107 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL11A1P12107 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL11A1P12107 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL11A1P12107 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL11A1P12107 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL11A1P12107 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL11A1P12107 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL11A1P12107 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.42■□□□□ 0.54
COL11A1P12107 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL11A1P12107 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.42■□□□□ 0.54
COL11A1P12107 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL11A1P12107 AC092171.3-201ENST00000610122 2651 ntBASIC18.41■□□□□ 0.54
COL11A1P12107 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.41■□□□□ 0.54
COL11A1P12107 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
COL11A1P12107 RNF165-205ENST00000588679 2904 ntBASIC18.41■□□□□ 0.54
COL11A1P12107 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.41■□□□□ 0.54
COL11A1P12107 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.41■□□□□ 0.54
COL11A1P12107 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
COL11A1P12107 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COL11A1P12107 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.41■□□□□ 0.54
COL11A1P12107 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.41■□□□□ 0.54
COL11A1P12107 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.41■□□□□ 0.54
COL11A1P12107 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.41■□□□□ 0.54
COL11A1P12107 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COL11A1P12107 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.41■□□□□ 0.54
COL11A1P12107 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms