Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.48■□□□□ 0.55
HOXC6P09630 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.47■□□□□ 0.55
HOXC6P09630 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HOXC6P09630 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HOXC6P09630 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HOXC6P09630 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.47■□□□□ 0.55
HOXC6P09630 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.47■□□□□ 0.55
HOXC6P09630 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
HOXC6P09630 AL139010.1-201ENST00000454878 894 ntBASIC18.47■□□□□ 0.55
HOXC6P09630 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.47■□□□□ 0.55
HOXC6P09630 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.47■□□□□ 0.55
HOXC6P09630 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.47■□□□□ 0.55
HOXC6P09630 TMEM261P1-201ENST00000604899 340 ntBASIC18.47■□□□□ 0.55
HOXC6P09630 AL512343.1-201ENST00000605837 169 ntBASIC18.47■□□□□ 0.55
HOXC6P09630 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
HOXC6P09630 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HOXC6P09630 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.47■□□□□ 0.55
HOXC6P09630 AC092068.3-201ENST00000587894 2016 ntBASIC18.47■□□□□ 0.55
HOXC6P09630 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HOXC6P09630 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.47■□□□□ 0.55
HOXC6P09630 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC6P09630 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC6P09630 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HOXC6P09630 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC6P09630 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HOXC6P09630 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXC6P09630 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC6P09630 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC6P09630 AL391256.1-201ENST00000443260 1855 ntBASIC18.46■□□□□ 0.55
HOXC6P09630 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC6P09630 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXC6P09630 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC6P09630 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.46■□□□□ 0.55
HOXC6P09630 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXC6P09630 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HOXC6P09630 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HOXC6P09630 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXC6P09630 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.46■□□□□ 0.55
HOXC6P09630 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.46■□□□□ 0.55
HOXC6P09630 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.46■□□□□ 0.55
HOXC6P09630 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.46■□□□□ 0.55
HOXC6P09630 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC6P09630 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.46■□□□□ 0.55
HOXC6P09630 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.46■□□□□ 0.55
HOXC6P09630 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.46■□□□□ 0.55
HOXC6P09630 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.46■□□□□ 0.55
HOXC6P09630 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC6P09630 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC6P09630 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HOXC6P09630 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC6P09630 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.45■□□□□ 0.54
HOXC6P09630 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HOXC6P09630 GPAA1P2-202ENST00000606848 1787 ntBASIC18.45■□□□□ 0.54
HOXC6P09630 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
HOXC6P09630 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXC6P09630 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.45■□□□□ 0.54
HOXC6P09630 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXC6P09630 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.45■□□□□ 0.54
HOXC6P09630 AC119751.2-201ENST00000504529 210 ntBASIC18.45■□□□□ 0.54
HOXC6P09630 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.45■□□□□ 0.54
HOXC6P09630 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HOXC6P09630 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.45■□□□□ 0.54
HOXC6P09630 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
HOXC6P09630 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.45■□□□□ 0.54
HOXC6P09630 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.45■□□□□ 0.54
HOXC6P09630 AC026471.1-201ENST00000564629 3026 ntBASIC18.45■□□□□ 0.54
HOXC6P09630 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXC6P09630 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HOXC6P09630 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HOXC6P09630 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms