Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.2■□□□□ 0.02
THBS1P07996 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 RHOQP3-201ENST00000437982 621 ntBASIC15.2■□□□□ 0.02
THBS1P07996 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.2■□□□□ 0.02
THBS1P07996 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 AC109635.5-201ENST00000533593 962 ntBASIC15.2■□□□□ 0.02
THBS1P07996 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.2■□□□□ 0.02
THBS1P07996 AC145285.3-201ENST00000564603 959 ntBASIC15.2■□□□□ 0.02
THBS1P07996 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
THBS1P07996 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.2■□□□□ 0.02
THBS1P07996 AL592424.1-201ENST00000563624 1536 ntBASIC15.2■□□□□ 0.02
THBS1P07996 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
THBS1P07996 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.2■□□□□ 0.02
THBS1P07996 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.19■□□□□ 0.02
THBS1P07996 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
THBS1P07996 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.19■□□□□ 0.02
THBS1P07996 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.19■□□□□ 0.02
THBS1P07996 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.19■□□□□ 0.02
THBS1P07996 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.19■□□□□ 0.02
THBS1P07996 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 AL603832.2-201ENST00000566195 2125 ntBASIC15.19■□□□□ 0.02
THBS1P07996 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.19■□□□□ 0.02
THBS1P07996 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.19■□□□□ 0.02
THBS1P07996 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
THBS1P07996 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.19■□□□□ 0.02
THBS1P07996 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.19■□□□□ 0.02
THBS1P07996 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.19■□□□□ 0.02
THBS1P07996 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
THBS1P07996 RPL13AP23-201ENST00000480739 586 ntBASIC15.19■□□□□ 0.02
THBS1P07996 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.19■□□□□ 0.02
THBS1P07996 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.19■□□□□ 0.02
THBS1P07996 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.19■□□□□ 0.02
THBS1P07996 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.19■□□□□ 0.02
THBS1P07996 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.19■□□□□ 0.02
THBS1P07996 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.19■□□□□ 0.02
THBS1P07996 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 AC005622.1-201ENST00000636801 1703 ntBASIC15.19■□□□□ 0.02
THBS1P07996 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THBS1P07996 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 U82695.1-201ENST00000635752 1889 ntBASIC15.18■□□□□ 0.02
THBS1P07996 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.18■□□□□ 0.02
THBS1P07996 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
THBS1P07996 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.18■□□□□ 0.02
THBS1P07996 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
THBS1P07996 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.18■□□□□ 0.02
THBS1P07996 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.18■□□□□ 0.02
THBS1P07996 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
THBS1P07996 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 MIR648-201ENST00000385046 94 ntBASIC15.18■□□□□ 0.02
THBS1P07996 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.18■□□□□ 0.02
THBS1P07996 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.18■□□□□ 0.02
THBS1P07996 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.18■□□□□ 0.02
THBS1P07996 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.18■□□□□ 0.02
THBS1P07996 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
THBS1P07996 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms