Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
APOBP04114 AL662890.1-201ENST00000396818 632 ntBASIC10.07□□□□□ -0.8
APOBP04114 AC016700.1-201ENST00000429424 312 ntBASIC10.07□□□□□ -0.8
APOBP04114 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC10.07□□□□□ -0.8
APOBP04114 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC10.07□□□□□ -0.8
APOBP04114 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
APOBP04114 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 AL365330.1-201ENST00000607459 531 ntBASIC10.06□□□□□ -0.8
APOBP04114 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC10.06□□□□□ -0.8
APOBP04114 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
APOBP04114 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC10.06□□□□□ -0.8
APOBP04114 MIR4321-201ENST00000592276 80 ntBASIC10.06□□□□□ -0.8
APOBP04114 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC10.06□□□□□ -0.8
APOBP04114 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC10.06□□□□□ -0.8
APOBP04114 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC10.06□□□□□ -0.8
APOBP04114 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC10.06□□□□□ -0.8
APOBP04114 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC10.06□□□□□ -0.8
APOBP04114 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
APOBP04114 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC10.06□□□□□ -0.8
APOBP04114 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
APOBP04114 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
APOBP04114 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC10.06□□□□□ -0.8
APOBP04114 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC10.06□□□□□ -0.8
APOBP04114 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.06□□□□□ -0.8
APOBP04114 AC026410.3-201ENST00000514280 936 ntBASIC10.06□□□□□ -0.8
APOBP04114 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 AC015910.1-201ENST00000579400 975 ntBASIC10.06□□□□□ -0.8
APOBP04114 METTL26-214ENST00000614890 801 ntTSL 3 BASIC10.06□□□□□ -0.8
APOBP04114 AL096828.3-201ENST00000615354 462 ntBASIC10.06□□□□□ -0.8
APOBP04114 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
APOBP04114 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
APOBP04114 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC10.06□□□□□ -0.8
APOBP04114 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC10.06□□□□□ -0.8
APOBP04114 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC10.06□□□□□ -0.8
APOBP04114 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOBP04114 HNRNPA1P32-201ENST00000396326 963 ntBASIC10.06□□□□□ -0.8
APOBP04114 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.06□□□□□ -0.8
APOBP04114 AC106760.1-201ENST00000508690 800 ntBASIC10.06□□□□□ -0.8
APOBP04114 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
APOBP04114 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC10.06□□□□□ -0.8
APOBP04114 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC10.06□□□□□ -0.8
APOBP04114 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC10.06□□□□□ -0.8
APOBP04114 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC10.05□□□□□ -0.8
APOBP04114 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC10.05□□□□□ -0.8
APOBP04114 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC10.05□□□□□ -0.8
APOBP04114 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
APOBP04114 AC012441.1-201ENST00000446669 685 ntBASIC10.05□□□□□ -0.8
APOBP04114 RN7SL720P-201ENST00000488178 304 ntBASIC10.05□□□□□ -0.8
APOBP04114 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.05□□□□□ -0.8
APOBP04114 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC10.05□□□□□ -0.8
APOBP04114 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms