Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
KRT6AP02538 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.04■□□□□ 0.16
KRT6AP02538 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
KRT6AP02538 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
KRT6AP02538 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT6AP02538 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT6AP02538 AC012569.1-201ENST00000591191 1524 ntBASIC16.04■□□□□ 0.16
KRT6AP02538 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6AP02538 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6AP02538 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
KRT6AP02538 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6AP02538 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6AP02538 AC022188.1-201ENST00000620960 1664 ntBASIC16.03■□□□□ 0.16
KRT6AP02538 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6AP02538 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
KRT6AP02538 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.03■□□□□ 0.16
KRT6AP02538 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6AP02538 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6AP02538 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.03■□□□□ 0.16
KRT6AP02538 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6AP02538 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6AP02538 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6AP02538 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6AP02538 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.03■□□□□ 0.16
KRT6AP02538 LINC02199-201ENST00000506655 2702 ntBASIC16.03■□□□□ 0.16
KRT6AP02538 AL596087.1-201ENST00000400979 1969 ntBASIC16.03■□□□□ 0.16
KRT6AP02538 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6AP02538 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6AP02538 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 AC008741.2-201ENST00000612792 3115 ntBASIC16.03■□□□□ 0.16
KRT6AP02538 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6AP02538 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6AP02538 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6AP02538 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6AP02538 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
KRT6AP02538 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
KRT6AP02538 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6AP02538 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT6AP02538 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
KRT6AP02538 AC006449.6-201ENST00000612330 2296 ntBASIC16.02■□□□□ 0.16
KRT6AP02538 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
KRT6AP02538 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT6AP02538 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6AP02538 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6AP02538 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT6AP02538 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6AP02538 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6AP02538 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6AP02538 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT6AP02538 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT6AP02538 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6AP02538 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT6AP02538 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT6AP02538 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.02■□□□□ 0.16
KRT6AP02538 AC108073.2-201ENST00000464002 357 ntBASIC16.02■□□□□ 0.16
KRT6AP02538 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
KRT6AP02538 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT6AP02538 AC012640.2-201ENST00000561606 901 ntBASIC16.02■□□□□ 0.16
KRT6AP02538 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
KRT6AP02538 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT6AP02538 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT6AP02538 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT6AP02538 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6AP02538 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT6AP02538 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
KRT6AP02538 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.02■□□□□ 0.15
KRT6AP02538 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.02■□□□□ 0.15
KRT6AP02538 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.02■□□□□ 0.15
KRT6AP02538 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.02■□□□□ 0.15
KRT6AP02538 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
KRT6AP02538 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KRT6AP02538 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT6AP02538 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
KRT6AP02538 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.02■□□□□ 0.15
KRT6AP02538 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT6AP02538 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT6AP02538 AC063926.3-201ENST00000624734 5658 ntBASIC16.01■□□□□ 0.15
KRT6AP02538 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
KRT6AP02538 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT6AP02538 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT6AP02538 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT6AP02538 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.01■□□□□ 0.15
KRT6AP02538 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT6AP02538 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT6AP02538 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT6AP02538 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT6AP02538 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms