Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.86□□□□□ -0.19
SIX6O95475 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 AC069224.1-201ENST00000566372 1715 ntBASIC13.86□□□□□ -0.19
SIX6O95475 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SIX6O95475 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SIX6O95475 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SIX6O95475 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.85□□□□□ -0.19
SIX6O95475 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SIX6O95475 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
SIX6O95475 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
SIX6O95475 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
SIX6O95475 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.85□□□□□ -0.19
SIX6O95475 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.85□□□□□ -0.19
SIX6O95475 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 MYO15B-237ENST00000642007 4893 ntBASIC13.85□□□□□ -0.19
SIX6O95475 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 AL135905.2-201ENST00000584934 1404 ntBASIC13.85□□□□□ -0.19
SIX6O95475 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.85□□□□□ -0.19
SIX6O95475 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.85□□□□□ -0.19
SIX6O95475 AC128676.1-201ENST00000454392 318 ntBASIC13.85□□□□□ -0.19
SIX6O95475 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SIX6O95475 AC010653.2-201ENST00000623505 997 ntBASIC13.85□□□□□ -0.19
SIX6O95475 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.85□□□□□ -0.19
SIX6O95475 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.85□□□□□ -0.19
SIX6O95475 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SIX6O95475 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.85□□□□□ -0.19
SIX6O95475 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SIX6O95475 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.85□□□□□ -0.19
SIX6O95475 AC007292.2-201ENST00000593524 1812 ntBASIC13.85□□□□□ -0.19
SIX6O95475 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SIX6O95475 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SIX6O95475 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIX6O95475 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SIX6O95475 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 AL021920.2-201ENST00000624828 1351 ntBASIC13.84□□□□□ -0.19
SIX6O95475 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
SIX6O95475 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 AC006277.1-201ENST00000624348 1610 ntBASIC13.84□□□□□ -0.19
SIX6O95475 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 INGX-201ENST00000359239 846 ntBASIC13.84□□□□□ -0.19
SIX6O95475 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.84□□□□□ -0.19
SIX6O95475 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.84□□□□□ -0.19
SIX6O95475 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.84□□□□□ -0.19
SIX6O95475 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.84□□□□□ -0.19
SIX6O95475 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.84□□□□□ -0.19
SIX6O95475 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.84□□□□□ -0.19
SIX6O95475 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.84□□□□□ -0.19
SIX6O95475 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.84□□□□□ -0.19
SIX6O95475 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.84□□□□□ -0.19
SIX6O95475 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.84□□□□□ -0.19
SIX6O95475 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.84□□□□□ -0.19
SIX6O95475 AC079602.3-201ENST00000623931 403 ntBASIC13.84□□□□□ -0.19
SIX6O95475 AL391807.1-203ENST00000604392 2365 ntBASIC13.84□□□□□ -0.19
SIX6O95475 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.84□□□□□ -0.19
SIX6O95475 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SIX6O95475 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms