Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
LTN1O94822 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.46■■□□□ 1.03
LTN1O94822 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.46■■□□□ 1.03
LTN1O94822 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.46■■□□□ 1.03
LTN1O94822 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.46■■□□□ 1.03
LTN1O94822 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.46■■□□□ 1.03
LTN1O94822 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC21.46■■□□□ 1.03
LTN1O94822 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LTN1O94822 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.46■■□□□ 1.03
LTN1O94822 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC21.46■■□□□ 1.03
LTN1O94822 AL033527.5-201ENST00000641382 801 ntBASIC21.46■■□□□ 1.03
LTN1O94822 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.45■■□□□ 1.03
LTN1O94822 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LTN1O94822 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LTN1O94822 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.45■■□□□ 1.02
LTN1O94822 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LTN1O94822 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LTN1O94822 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LTN1O94822 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LTN1O94822 TOMM22P5-201ENST00000416399 439 ntBASIC21.45■■□□□ 1.02
LTN1O94822 RPL13P2-201ENST00000440687 659 ntBASIC21.45■■□□□ 1.02
LTN1O94822 RN7SL399P-201ENST00000471648 279 ntBASIC21.45■■□□□ 1.02
LTN1O94822 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LTN1O94822 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC21.45■■□□□ 1.02
LTN1O94822 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.45■■□□□ 1.02
LTN1O94822 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.45■■□□□ 1.02
LTN1O94822 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.45■■□□□ 1.02
LTN1O94822 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.45■■□□□ 1.02
LTN1O94822 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.45■■□□□ 1.02
LTN1O94822 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LTN1O94822 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.45■■□□□ 1.02
LTN1O94822 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LTN1O94822 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LTN1O94822 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LTN1O94822 AL691432.1-201ENST00000596308 1422 ntBASIC21.45■■□□□ 1.02
LTN1O94822 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LTN1O94822 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LTN1O94822 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC21.44■■□□□ 1.02
LTN1O94822 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.44■■□□□ 1.02
LTN1O94822 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.44■■□□□ 1.02
LTN1O94822 POU5F1P6-201ENST00000466990 990 ntBASIC21.44■■□□□ 1.02
LTN1O94822 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.44■■□□□ 1.02
LTN1O94822 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC21.44■■□□□ 1.02
LTN1O94822 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC21.44■■□□□ 1.02
LTN1O94822 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.44■■□□□ 1.02
LTN1O94822 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
LTN1O94822 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LTN1O94822 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LTN1O94822 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
LTN1O94822 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LTN1O94822 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
LTN1O94822 AC092658.1-201ENST00000505836 891 ntBASIC21.43■■□□□ 1.02
LTN1O94822 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC21.43■■□□□ 1.02
LTN1O94822 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.43■■□□□ 1.02
LTN1O94822 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.43■■□□□ 1.02
LTN1O94822 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.43■■□□□ 1.02
LTN1O94822 RPS24-214ENST00000613865 538 ntTSL 5 BASIC21.43■■□□□ 1.02
LTN1O94822 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.43■■□□□ 1.02
LTN1O94822 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LTN1O94822 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LTN1O94822 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.43■■□□□ 1.02
LTN1O94822 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.43■■□□□ 1.02
LTN1O94822 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LTN1O94822 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LTN1O94822 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.43■■□□□ 1.02
LTN1O94822 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LTN1O94822 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
LTN1O94822 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LTN1O94822 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.43■■□□□ 1.02
LTN1O94822 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC21.43■■□□□ 1.02
LTN1O94822 AC068587.3-201ENST00000526613 355 ntBASIC21.43■■□□□ 1.02
LTN1O94822 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC21.43■■□□□ 1.02
LTN1O94822 AC243562.2-201ENST00000561247 970 ntBASIC21.43■■□□□ 1.02
LTN1O94822 AC233724.13-201ENST00000598383 410 ntBASIC21.43■■□□□ 1.02
LTN1O94822 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
LTN1O94822 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
LTN1O94822 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
LTN1O94822 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LTN1O94822 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LTN1O94822 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.42■■□□□ 1.02
LTN1O94822 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.42■■□□□ 1.02
LTN1O94822 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LTN1O94822 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
LTN1O94822 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms