Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
SSSCA1O60232 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SSSCA1O60232 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.52□□□□□ -0.24
SSSCA1O60232 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SSSCA1O60232 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSSCA1O60232 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 SIGLEC30P-201ENST00000455569 941 ntBASIC13.52□□□□□ -0.25
SSSCA1O60232 RN7SL606P-201ENST00000472779 293 ntBASIC13.52□□□□□ -0.25
SSSCA1O60232 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.52□□□□□ -0.25
SSSCA1O60232 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.52□□□□□ -0.25
SSSCA1O60232 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.52□□□□□ -0.25
SSSCA1O60232 AC009533.2-201ENST00000543664 586 ntBASIC13.52□□□□□ -0.25
SSSCA1O60232 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.52□□□□□ -0.25
SSSCA1O60232 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.52□□□□□ -0.25
SSSCA1O60232 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.52□□□□□ -0.25
SSSCA1O60232 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.52□□□□□ -0.25
SSSCA1O60232 CDC14C-201ENST00000428251 1719 ntBASIC13.52□□□□□ -0.25
SSSCA1O60232 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.52□□□□□ -0.25
SSSCA1O60232 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SSSCA1O60232 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.52□□□□□ -0.25
SSSCA1O60232 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SSSCA1O60232 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.52□□□□□ -0.25
SSSCA1O60232 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.52□□□□□ -0.25
SSSCA1O60232 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 MYO15B-237ENST00000642007 4893 ntBASIC13.52□□□□□ -0.25
SSSCA1O60232 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSSCA1O60232 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SSSCA1O60232 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SSSCA1O60232 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.51□□□□□ -0.25
SSSCA1O60232 AL031731.1-201ENST00000642131 2094 ntBASIC13.51□□□□□ -0.25
SSSCA1O60232 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SSSCA1O60232 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
SSSCA1O60232 AC148477.5-201ENST00000625164 1645 ntBASIC13.51□□□□□ -0.25
SSSCA1O60232 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.51□□□□□ -0.25
SSSCA1O60232 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.51□□□□□ -0.25
SSSCA1O60232 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
SSSCA1O60232 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.51□□□□□ -0.25
SSSCA1O60232 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.51□□□□□ -0.25
SSSCA1O60232 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.51□□□□□ -0.25
SSSCA1O60232 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SSSCA1O60232 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 PPT1-215ENST00000641471 2368 ntBASIC13.51□□□□□ -0.25
SSSCA1O60232 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.51□□□□□ -0.25
SSSCA1O60232 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SSSCA1O60232 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSSCA1O60232 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.51□□□□□ -0.25
SSSCA1O60232 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.5□□□□□ -0.25
SSSCA1O60232 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SSSCA1O60232 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
SSSCA1O60232 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.5□□□□□ -0.25
SSSCA1O60232 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SSSCA1O60232 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.5□□□□□ -0.25
SSSCA1O60232 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SSSCA1O60232 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SSSCA1O60232 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.5□□□□□ -0.25
SSSCA1O60232 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms