Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP2AO43633 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP2AO43633 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP2AO43633 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP2AO43633 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP2AO43633 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CHMP2AO43633 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP2AO43633 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.53■□□□□ 0.56
CHMP2AO43633 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.53■□□□□ 0.56
CHMP2AO43633 GPS2P2-201ENST00000430745 888 ntBASIC18.53■□□□□ 0.56
CHMP2AO43633 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP2AO43633 AC105233.2-201ENST00000523697 349 ntBASIC18.53■□□□□ 0.56
CHMP2AO43633 AF228730.5-201ENST00000530288 346 ntBASIC18.53■□□□□ 0.56
CHMP2AO43633 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CHMP2AO43633 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.53■□□□□ 0.56
CHMP2AO43633 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP2AO43633 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CHMP2AO43633 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP2AO43633 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP2AO43633 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2AO43633 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CHMP2AO43633 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP2AO43633 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP2AO43633 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CHMP2AO43633 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHMP2AO43633 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP2AO43633 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CHMP2AO43633 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP2AO43633 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2AO43633 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
CHMP2AO43633 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2AO43633 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2AO43633 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHMP2AO43633 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2AO43633 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CHMP2AO43633 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
CHMP2AO43633 AC142381.1-201ENST00000426099 345 ntBASIC18.52■□□□□ 0.56
CHMP2AO43633 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP2AO43633 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.52■□□□□ 0.56
CHMP2AO43633 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.52■□□□□ 0.56
CHMP2AO43633 AC106028.4-201ENST00000614509 607 ntBASIC18.52■□□□□ 0.56
CHMP2AO43633 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2AO43633 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP2AO43633 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2AO43633 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.52■□□□□ 0.55
CHMP2AO43633 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.52■□□□□ 0.55
CHMP2AO43633 PCDHA14-201ENST00000506751 2298 ntBASIC18.52■□□□□ 0.55
CHMP2AO43633 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
CHMP2AO43633 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP2AO43633 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP2AO43633 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.52■□□□□ 0.55
CHMP2AO43633 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CHMP2AO43633 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP2AO43633 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHMP2AO43633 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP2AO43633 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CHMP2AO43633 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP2AO43633 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP2AO43633 FOXO1B-201ENST00000504678 1527 ntBASIC18.51■□□□□ 0.55
CHMP2AO43633 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CHMP2AO43633 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHMP2AO43633 MIR346-201ENST00000362234 95 ntBASIC18.51■□□□□ 0.55
CHMP2AO43633 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2AO43633 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP2AO43633 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.51■□□□□ 0.55
CHMP2AO43633 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.51■□□□□ 0.55
CHMP2AO43633 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms