Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.42□□□□□ -0.42
SNAI2O43623 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SNAI2O43623 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.42□□□□□ -0.42
SNAI2O43623 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SNAI2O43623 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.42□□□□□ -0.42
SNAI2O43623 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.42□□□□□ -0.42
SNAI2O43623 AC117947.1-201ENST00000427448 529 ntBASIC12.42□□□□□ -0.42
SNAI2O43623 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.42□□□□□ -0.42
SNAI2O43623 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.42□□□□□ -0.42
SNAI2O43623 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.42□□□□□ -0.42
SNAI2O43623 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.42□□□□□ -0.42
SNAI2O43623 AL592071.1-201ENST00000611956 408 ntBASIC12.42□□□□□ -0.42
SNAI2O43623 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
SNAI2O43623 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.42□□□□□ -0.42
SNAI2O43623 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
SNAI2O43623 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.42□□□□□ -0.42
SNAI2O43623 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SNAI2O43623 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.42□□□□□ -0.42
SNAI2O43623 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.42□□□□□ -0.42
SNAI2O43623 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.42□□□□□ -0.42
SNAI2O43623 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SNAI2O43623 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.42□□□□□ -0.42
SNAI2O43623 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
SNAI2O43623 AL021920.2-201ENST00000624828 1351 ntBASIC12.42□□□□□ -0.42
SNAI2O43623 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.42□□□□□ -0.42
SNAI2O43623 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNAI2O43623 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.42□□□□□ -0.42
SNAI2O43623 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SNAI2O43623 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SNAI2O43623 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
SNAI2O43623 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SNAI2O43623 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.41□□□□□ -0.42
SNAI2O43623 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.41□□□□□ -0.42
SNAI2O43623 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
SNAI2O43623 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SNAI2O43623 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SNAI2O43623 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.41□□□□□ -0.42
SNAI2O43623 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.41□□□□□ -0.42
SNAI2O43623 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 AL845331.1-201ENST00000424978 1190 ntBASIC12.41□□□□□ -0.42
SNAI2O43623 ACTG1P4-201ENST00000425123 1122 ntBASIC12.41□□□□□ -0.42
SNAI2O43623 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.41□□□□□ -0.42
SNAI2O43623 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.41□□□□□ -0.42
SNAI2O43623 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.41□□□□□ -0.42
SNAI2O43623 AC009533.2-201ENST00000543664 586 ntBASIC12.41□□□□□ -0.42
SNAI2O43623 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SNAI2O43623 AL139011.1-202ENST00000642063 584 ntBASIC12.41□□□□□ -0.42
SNAI2O43623 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SNAI2O43623 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNAI2O43623 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms