Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.6■□□□□ 0.25
SMAD6O43541 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD6O43541 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SMAD6O43541 PCDHA14-201ENST00000506751 2298 ntBASIC16.6■□□□□ 0.25
SMAD6O43541 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SMAD6O43541 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SMAD6O43541 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.6■□□□□ 0.25
SMAD6O43541 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SMAD6O43541 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.6■□□□□ 0.25
SMAD6O43541 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.6■□□□□ 0.25
SMAD6O43541 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD6O43541 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.6■□□□□ 0.25
SMAD6O43541 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SMAD6O43541 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.6■□□□□ 0.25
SMAD6O43541 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD6O43541 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.6■□□□□ 0.25
SMAD6O43541 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD6O43541 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.6■□□□□ 0.25
SMAD6O43541 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.6■□□□□ 0.25
SMAD6O43541 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD6O43541 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SMAD6O43541 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SMAD6O43541 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD6O43541 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SMAD6O43541 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.59■□□□□ 0.25
SMAD6O43541 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SMAD6O43541 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.59■□□□□ 0.25
SMAD6O43541 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SMAD6O43541 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.59■□□□□ 0.25
SMAD6O43541 MIR770-201ENST00000390219 98 ntBASIC16.59■□□□□ 0.25
SMAD6O43541 AC107890.1-201ENST00000422478 521 ntBASIC16.59■□□□□ 0.25
SMAD6O43541 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.59■□□□□ 0.25
SMAD6O43541 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.59■□□□□ 0.25
SMAD6O43541 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.59■□□□□ 0.25
SMAD6O43541 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SMAD6O43541 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SMAD6O43541 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.59■□□□□ 0.25
SMAD6O43541 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SMAD6O43541 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SMAD6O43541 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.59■□□□□ 0.25
SMAD6O43541 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD6O43541 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
SMAD6O43541 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMAD6O43541 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
SMAD6O43541 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMAD6O43541 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMAD6O43541 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.58■□□□□ 0.24
SMAD6O43541 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.58■□□□□ 0.24
SMAD6O43541 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 MIR943-201ENST00000401286 94 ntBASIC16.58■□□□□ 0.24
SMAD6O43541 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.58■□□□□ 0.24
SMAD6O43541 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SMAD6O43541 FO538757.1-201ENST00000623083 1397 ntBASIC16.58■□□□□ 0.24
SMAD6O43541 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SMAD6O43541 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
SMAD6O43541 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.58■□□□□ 0.24
SMAD6O43541 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.58■□□□□ 0.24
SMAD6O43541 ME2P1-201ENST00000426028 1970 ntBASIC16.58■□□□□ 0.24
SMAD6O43541 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms