Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COCHO43405 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.96■□□□□ 0.3
COCHO43405 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.96■□□□□ 0.3
COCHO43405 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
COCHO43405 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
COCHO43405 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.95■□□□□ 0.3
COCHO43405 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.95■□□□□ 0.3
COCHO43405 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.95■□□□□ 0.3
COCHO43405 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.95■□□□□ 0.3
COCHO43405 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.95■□□□□ 0.3
COCHO43405 AC236430.1-201ENST00000402231 743 ntBASIC16.95■□□□□ 0.3
COCHO43405 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.95■□□□□ 0.3
COCHO43405 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.95■□□□□ 0.3
COCHO43405 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.95■□□□□ 0.3
COCHO43405 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.95■□□□□ 0.3
COCHO43405 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.95■□□□□ 0.3
COCHO43405 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.95■□□□□ 0.3
COCHO43405 RN7SL204P-201ENST00000582831 262 ntBASIC16.95■□□□□ 0.3
COCHO43405 AC138761.1-201ENST00000584393 385 ntBASIC16.95■□□□□ 0.3
COCHO43405 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.95■□□□□ 0.3
COCHO43405 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.95■□□□□ 0.3
COCHO43405 TEX28P1-201ENST00000613479 1221 ntBASIC16.95■□□□□ 0.3
COCHO43405 TEX28P2-201ENST00000617764 1221 ntBASIC16.95■□□□□ 0.3
COCHO43405 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.95■□□□□ 0.3
COCHO43405 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.95■□□□□ 0.3
COCHO43405 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.95■□□□□ 0.3
COCHO43405 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.95■□□□□ 0.3
COCHO43405 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.95■□□□□ 0.3
COCHO43405 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COCHO43405 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
COCHO43405 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.94■□□□□ 0.3
COCHO43405 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.94■□□□□ 0.3
COCHO43405 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 PKD1P1-201ENST00000458669 6805 ntBASIC16.94■□□□□ 0.3
COCHO43405 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COCHO43405 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COCHO43405 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
COCHO43405 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
COCHO43405 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
COCHO43405 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.94■□□□□ 0.3
COCHO43405 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.94■□□□□ 0.3
COCHO43405 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.94■□□□□ 0.3
COCHO43405 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 MRPS18AP1-201ENST00000414458 589 ntBASIC16.94■□□□□ 0.3
COCHO43405 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.94■□□□□ 0.3
COCHO43405 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.94■□□□□ 0.3
COCHO43405 AC002472.2-201ENST00000442739 958 ntBASIC16.94■□□□□ 0.3
COCHO43405 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.94■□□□□ 0.3
COCHO43405 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.94■□□□□ 0.3
COCHO43405 AL079307.3-201ENST00000556114 283 ntBASIC16.94■□□□□ 0.3
COCHO43405 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COCHO43405 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 AC011676.5-201ENST00000624864 2660 ntBASIC16.94■□□□□ 0.3
COCHO43405 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COCHO43405 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COCHO43405 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COCHO43405 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 U82695.1-201ENST00000635752 1889 ntBASIC16.94■□□□□ 0.3
COCHO43405 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.94■□□□□ 0.3
COCHO43405 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.94■□□□□ 0.3
COCHO43405 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COCHO43405 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.94■□□□□ 0.3
COCHO43405 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.94■□□□□ 0.3
COCHO43405 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COCHO43405 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COCHO43405 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.93■□□□□ 0.3
COCHO43405 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COCHO43405 AGGF1P2-201ENST00000426656 2106 ntBASIC16.93■□□□□ 0.3
COCHO43405 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.93■□□□□ 0.3
COCHO43405 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms