Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.11■□□□□ 0.33
MSI1O43347 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.11■□□□□ 0.33
MSI1O43347 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.11■□□□□ 0.33
MSI1O43347 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MSI1O43347 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.11■□□□□ 0.33
MSI1O43347 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MSI1O43347 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
MSI1O43347 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MSI1O43347 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.1■□□□□ 0.33
MSI1O43347 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.1■□□□□ 0.33
MSI1O43347 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.1■□□□□ 0.33
MSI1O43347 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.1■□□□□ 0.33
MSI1O43347 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MSI1O43347 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.1■□□□□ 0.33
MSI1O43347 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MSI1O43347 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
MSI1O43347 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.1■□□□□ 0.33
MSI1O43347 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.1■□□□□ 0.33
MSI1O43347 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.1■□□□□ 0.33
MSI1O43347 SPDYE14P-201ENST00000442619 822 ntBASIC17.1■□□□□ 0.33
MSI1O43347 AC093724.1-201ENST00000448659 1027 ntBASIC17.1■□□□□ 0.33
MSI1O43347 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.1■□□□□ 0.33
MSI1O43347 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.1■□□□□ 0.33
MSI1O43347 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.1■□□□□ 0.33
MSI1O43347 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.1■□□□□ 0.33
MSI1O43347 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.1■□□□□ 0.33
MSI1O43347 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MSI1O43347 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MSI1O43347 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.1■□□□□ 0.33
MSI1O43347 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MSI1O43347 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MSI1O43347 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
MSI1O43347 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MSI1O43347 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MSI1O43347 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
MSI1O43347 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MSI1O43347 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSI1O43347 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSI1O43347 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MSI1O43347 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.09■□□□□ 0.33
MSI1O43347 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MSI1O43347 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.09■□□□□ 0.33
MSI1O43347 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.09■□□□□ 0.33
MSI1O43347 ALG1L8P-201ENST00000533887 760 ntBASIC17.09■□□□□ 0.33
MSI1O43347 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.09■□□□□ 0.33
MSI1O43347 AC026150.2-201ENST00000564693 1156 ntBASIC17.09■□□□□ 0.33
MSI1O43347 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.09■□□□□ 0.33
MSI1O43347 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.09■□□□□ 0.33
MSI1O43347 AC106028.4-201ENST00000614509 607 ntBASIC17.09■□□□□ 0.33
MSI1O43347 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.09■□□□□ 0.33
MSI1O43347 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSI1O43347 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MSI1O43347 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSI1O43347 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MSI1O43347 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MSI1O43347 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.09■□□□□ 0.33
MSI1O43347 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.09■□□□□ 0.33
MSI1O43347 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.09■□□□□ 0.33
MSI1O43347 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSI1O43347 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSI1O43347 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MSI1O43347 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
MSI1O43347 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MSI1O43347 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MSI1O43347 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MSI1O43347 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MSI1O43347 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MSI1O43347 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MSI1O43347 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.08■□□□□ 0.33
MSI1O43347 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.08■□□□□ 0.33
MSI1O43347 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
MSI1O43347 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.08■□□□□ 0.32
MSI1O43347 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
MSI1O43347 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms