Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.56■□□□□ 0.4
CEP290O15078 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.56■□□□□ 0.4
CEP290O15078 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.56■□□□□ 0.4
CEP290O15078 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.56■□□□□ 0.4
CEP290O15078 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.56■□□□□ 0.4
CEP290O15078 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CEP290O15078 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CEP290O15078 RPL13AP19-201ENST00000434320 584 ntBASIC17.56■□□□□ 0.4
CEP290O15078 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.56■□□□□ 0.4
CEP290O15078 FAM86LP-201ENST00000478302 853 ntBASIC17.56■□□□□ 0.4
CEP290O15078 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 MIR6756-201ENST00000616240 63 ntBASIC17.56■□□□□ 0.4
CEP290O15078 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEP290O15078 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CEP290O15078 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 AC108860.2-201ENST00000562760 2183 ntBASIC17.55■□□□□ 0.4
CEP290O15078 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.55■□□□□ 0.4
CEP290O15078 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.55■□□□□ 0.4
CEP290O15078 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CEP290O15078 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.55■□□□□ 0.4
CEP290O15078 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CEP290O15078 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.55■□□□□ 0.4
CEP290O15078 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.55■□□□□ 0.4
CEP290O15078 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.55■□□□□ 0.4
CEP290O15078 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CEP290O15078 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.55■□□□□ 0.4
CEP290O15078 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.55■□□□□ 0.4
CEP290O15078 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.55■□□□□ 0.4
CEP290O15078 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.55■□□□□ 0.4
CEP290O15078 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.55■□□□□ 0.4
CEP290O15078 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.55■□□□□ 0.4
CEP290O15078 AC135983.4-201ENST00000564116 1262 ntBASIC17.55■□□□□ 0.4
CEP290O15078 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
CEP290O15078 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CEP290O15078 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.55■□□□□ 0.4
CEP290O15078 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
CEP290O15078 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CEP290O15078 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CEP290O15078 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.54■□□□□ 0.4
CEP290O15078 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CEP290O15078 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CEP290O15078 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 AC006001.1-201ENST00000325130 474 ntBASIC17.54■□□□□ 0.4
CEP290O15078 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.54■□□□□ 0.4
CEP290O15078 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 AC125604.1-201ENST00000496255 707 ntBASIC17.54■□□□□ 0.4
CEP290O15078 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.54■□□□□ 0.4
CEP290O15078 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.54■□□□□ 0.4
CEP290O15078 MIR4741-201ENST00000579822 90 ntBASIC17.54■□□□□ 0.4
CEP290O15078 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CEP290O15078 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.54■□□□□ 0.4
CEP290O15078 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
CEP290O15078 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.54■□□□□ 0.4
CEP290O15078 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.54■□□□□ 0.4
CEP290O15078 AC006480.2-201ENST00000609770 1337 ntBASIC17.54■□□□□ 0.4
CEP290O15078 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CEP290O15078 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 Z97205.2-201ENST00000564697 1639 ntBASIC17.54■□□□□ 0.4
CEP290O15078 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CEP290O15078 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CEP290O15078 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 CYP46A4P-201ENST00000414953 267 ntBASIC17.54■□□□□ 0.4
CEP290O15078 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.54■□□□□ 0.4
CEP290O15078 IMP3P2-201ENST00000489760 475 ntBASIC17.54■□□□□ 0.4
CEP290O15078 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.54■□□□□ 0.4
CEP290O15078 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.54■□□□□ 0.4
CEP290O15078 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms