Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.32■□□□□ 0.36
SOX1O00570 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 FAM86LP-201ENST00000478302 853 ntBASIC17.32■□□□□ 0.36
SOX1O00570 RPSAP36-202ENST00000494591 1261 ntBASIC17.32■□□□□ 0.36
SOX1O00570 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.32■□□□□ 0.36
SOX1O00570 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SOX1O00570 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
SOX1O00570 AC009486.1-201ENST00000569860 813 ntBASIC17.32■□□□□ 0.36
SOX1O00570 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.32■□□□□ 0.36
SOX1O00570 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.32■□□□□ 0.36
SOX1O00570 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
SOX1O00570 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.32■□□□□ 0.36
SOX1O00570 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.32■□□□□ 0.36
SOX1O00570 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SOX1O00570 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.31■□□□□ 0.36
SOX1O00570 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.31■□□□□ 0.36
SOX1O00570 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.31■□□□□ 0.36
SOX1O00570 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX1O00570 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX1O00570 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.31■□□□□ 0.36
SOX1O00570 MTX1P1-201ENST00000440904 838 ntBASIC17.31■□□□□ 0.36
SOX1O00570 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX1O00570 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.31■□□□□ 0.36
SOX1O00570 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX1O00570 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SOX1O00570 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.31■□□□□ 0.36
SOX1O00570 AL096828.3-201ENST00000615354 462 ntBASIC17.31■□□□□ 0.36
SOX1O00570 AP001505.2-201ENST00000616815 443 ntBASIC17.31■□□□□ 0.36
SOX1O00570 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SOX1O00570 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX1O00570 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX1O00570 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
SOX1O00570 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
SOX1O00570 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SOX1O00570 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.3■□□□□ 0.36
SOX1O00570 EEF1DP6-201ENST00000449232 372 ntBASIC17.3■□□□□ 0.36
SOX1O00570 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
SOX1O00570 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.3■□□□□ 0.36
SOX1O00570 AC093433.1-201ENST00000458048 571 ntBASIC17.3■□□□□ 0.36
SOX1O00570 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.3■□□□□ 0.36
SOX1O00570 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.3■□□□□ 0.36
SOX1O00570 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.3■□□□□ 0.36
SOX1O00570 AL353726.2-201ENST00000623259 884 ntBASIC17.3■□□□□ 0.36
SOX1O00570 LINC01451-201ENST00000623792 534 ntBASIC17.3■□□□□ 0.36
SOX1O00570 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SOX1O00570 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SOX1O00570 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.3■□□□□ 0.36
SOX1O00570 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 AP000974.1-201ENST00000623909 2387 ntBASIC17.3■□□□□ 0.36
SOX1O00570 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SOX1O00570 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX1O00570 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.3■□□□□ 0.36
SOX1O00570 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms