Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 AC099336.1-201ENST00000417053 1171 ntBASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 APRT-204ENST00000563655 709 ntTSL 5 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 RN7SL219P-201ENST00000582872 296 ntBASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 CU634019.7-201ENST00000624153 1185 ntBASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 FP236241.2-201ENST00000624906 1185 ntBASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC25.03■■□□□ 1.6
PLEKHD1A6NEE1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 TUBB1P2-201ENST00000422712 1306 ntBASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 TUBB1P1-201ENST00000503144 1300 ntBASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 KRT8P44-201ENST00000441609 1350 ntBASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC25.02■■□□□ 1.6
PLEKHD1A6NEE1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 RPL13P2-201ENST00000440687 659 ntBASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 AL022328.1-201ENST00000610050 478 ntBASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC25.01■■□□□ 1.59
PLEKHD1A6NEE1 PP12613-201ENST00000424958 2230 ntBASIC25■■□□□ 1.59
PLEKHD1A6NEE1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 RNA5SP412-201ENST00000516234 123 ntBASIC25■■□□□ 1.59
PLEKHD1A6NEE1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC25■■□□□ 1.59
PLEKHD1A6NEE1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms