Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 AL662799.1-202ENST00000614205 422 ntBASIC14.38□□□□□ -0.11
MBD3L3A6NE82 AL033527.5-202ENST00000641632 1098 ntBASIC14.38□□□□□ -0.11
MBD3L3A6NE82 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 AC005332.8-201ENST00000622750 2735 ntBASIC14.38□□□□□ -0.11
MBD3L3A6NE82 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MBD3L3A6NE82 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 AC135586.1-201ENST00000539323 574 ntBASIC14.37□□□□□ -0.11
MBD3L3A6NE82 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.37□□□□□ -0.11
MBD3L3A6NE82 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.37□□□□□ -0.11
MBD3L3A6NE82 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.37□□□□□ -0.11
MBD3L3A6NE82 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.37□□□□□ -0.11
MBD3L3A6NE82 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.37□□□□□ -0.11
MBD3L3A6NE82 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MBD3L3A6NE82 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms