Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 AL079307.3-201ENST00000556114 283 ntBASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 AL358472.5-202ENST00000641448 1267 ntBASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 AL031731.1-201ENST00000642131 2094 ntBASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 AC009477.1-201ENST00000452936 217 ntBASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 AP005018.1-201ENST00000525475 301 ntBASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 BANF1P1-201ENST00000553684 263 ntBASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 AL133215.2-201ENST00000609242 977 ntBASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 AL662799.1-202ENST00000614205 422 ntBASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 AL589702.1-201ENST00000641229 1509 ntBASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3BA6NDS4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 AC009407.1-201ENST00000568958 598 ntBASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms