Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC22.04■■□□□ 1.12
SBNO1A3KN83 CYP4F24P-201ENST00000586049 1580 ntBASIC22.04■■□□□ 1.12
SBNO1A3KN83 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SBNO1A3KN83 AL031731.1-201ENST00000642131 2094 ntBASIC22.04■■□□□ 1.12
SBNO1A3KN83 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC22.04■■□□□ 1.12
SBNO1A3KN83 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SBNO1A3KN83 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SBNO1A3KN83 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SBNO1A3KN83 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SBNO1A3KN83 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 RNF165-205ENST00000588679 2904 ntBASIC22.03■■□□□ 1.12
SBNO1A3KN83 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 FO681548.1-201ENST00000455617 1132 ntBASIC22.03■■□□□ 1.12
SBNO1A3KN83 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 APRT-204ENST00000563655 709 ntTSL 5 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SBNO1A3KN83 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
SBNO1A3KN83 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SBNO1A3KN83 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SBNO1A3KN83 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SBNO1A3KN83 RELA-227ENST00000615805 2236 ntTSL 5 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SBNO1A3KN83 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SBNO1A3KN83 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SBNO1A3KN83 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SBNO1A3KN83 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC22.03■■□□□ 1.12
SBNO1A3KN83 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SBNO1A3KN83 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
SBNO1A3KN83 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
SBNO1A3KN83 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC22.02■■□□□ 1.12
SBNO1A3KN83 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SBNO1A3KN83 BCYRN1-201ENST00000418539 200 ntBASIC22.02■■□□□ 1.12
SBNO1A3KN83 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC22.02■■□□□ 1.12
SBNO1A3KN83 ACTG1P3-201ENST00000431775 1114 ntBASIC22.02■■□□□ 1.12
SBNO1A3KN83 SUOX-214ENST00000551841 906 ntTSL 3 BASIC22.02■■□□□ 1.12
SBNO1A3KN83 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC22.02■■□□□ 1.12
SBNO1A3KN83 RN7SL219P-201ENST00000582872 296 ntBASIC22.02■■□□□ 1.12
SBNO1A3KN83 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC22.02■■□□□ 1.12
SBNO1A3KN83 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SBNO1A3KN83 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SBNO1A3KN83 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SBNO1A3KN83 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
SBNO1A3KN83 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 APOC3-202ENST00000375345 604 ntTSL 5 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 AC036164.1-201ENST00000570544 333 ntBASIC22.01■■□□□ 1.11
SBNO1A3KN83 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 AL136982.4-201ENST00000437689 1740 ntBASIC22.01■■□□□ 1.11
SBNO1A3KN83 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC22.01■■□□□ 1.11
SBNO1A3KN83 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SBNO1A3KN83 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC22■■□□□ 1.11
SBNO1A3KN83 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SBNO1A3KN83 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC22■■□□□ 1.11
SBNO1A3KN83 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
SBNO1A3KN83 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC22■■□□□ 1.11
SBNO1A3KN83 USB1-202ENST00000423271 1217 ntTSL 2 BASIC22■■□□□ 1.11
SBNO1A3KN83 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC22■■□□□ 1.11
SBNO1A3KN83 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC22■■□□□ 1.11
SBNO1A3KN83 CSF2RBP1-201ENST00000447905 391 ntBASIC22■■□□□ 1.11
SBNO1A3KN83 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC22■■□□□ 1.11
SBNO1A3KN83 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22■■□□□ 1.11
SBNO1A3KN83 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC22■■□□□ 1.11
SBNO1A3KN83 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC22■■□□□ 1.11
SBNO1A3KN83 IGHV3OR16-16-201ENST00000563644 343 ntBASIC22■■□□□ 1.11
SBNO1A3KN83 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
SBNO1A3KN83 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SBNO1A3KN83 KRT8P22-201ENST00000562317 1415 ntBASIC22■■□□□ 1.11
SBNO1A3KN83 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms