Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 AC073347.1-201ENST00000421633 2643 ntBASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 AC068587.6-202ENST00000641839 5619 ntBASIC11.54□□□□□ -0.56
UBE2D4Q9Y2X8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 AC131009.4-201ENST00000624048 1740 ntBASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 PRYP5-201ENST00000451909 266 ntBASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 AL121956.5-201ENST00000625261 221 ntBASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 AC005332.1-201ENST00000577698 1310 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms