Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 ACTG1P4-201ENST00000425123 1122 ntBASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 SLC25A3P1-201ENST00000443844 931 ntBASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 GUSBP12-201ENST00000513727 720 ntBASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 KRT18P22-201ENST00000402024 1347 ntBASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 AL845331.1-201ENST00000424978 1190 ntBASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.56□□□□□ -0.24
RCL1Q9Y2P8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 SNX33P1-201ENST00000592116 1762 ntBASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.55□□□□□ -0.24
RCL1Q9Y2P8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms