Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 UXT-AS1-201ENST00000590504 1525 ntBASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 FAM58DP-201ENST00000428076 619 ntBASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 AC069335.1-201ENST00000489972 472 ntBASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 AC067863.1-201ENST00000494933 530 ntBASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 AC099398.1-201ENST00000567919 2776 ntBASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA1Q9UND3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 HCG4-201ENST00000418983 998 ntBASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 SPCS2P4-201ENST00000436160 681 ntBASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 BCRP1-201ENST00000444246 691 ntBASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 AC005498.2-205ENST00000593218 784 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms