Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 PKD1P5-201ENST00000532415 10291 ntBASIC14□□□□□ -0.17
CLN8Q9UBY8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14□□□□□ -0.17
CLN8Q9UBY8 LINC02199-201ENST00000506655 2702 ntBASIC14□□□□□ -0.17
CLN8Q9UBY8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLN8Q9UBY8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLN8Q9UBY8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLN8Q9UBY8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14□□□□□ -0.17
CLN8Q9UBY8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14□□□□□ -0.17
CLN8Q9UBY8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 DDT-204ENST00000404092 805 ntTSL 3 BASIC14□□□□□ -0.17
CLN8Q9UBY8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14□□□□□ -0.17
CLN8Q9UBY8 MKNK2P1-201ENST00000437526 628 ntBASIC14□□□□□ -0.17
CLN8Q9UBY8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14□□□□□ -0.17
CLN8Q9UBY8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CLN8Q9UBY8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14□□□□□ -0.17
CLN8Q9UBY8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLN8Q9UBY8 AC087641.1-201ENST00000557561 1021 ntBASIC14□□□□□ -0.17
CLN8Q9UBY8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14□□□□□ -0.17
CLN8Q9UBY8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14□□□□□ -0.17
CLN8Q9UBY8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
CLN8Q9UBY8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 AL078644.1-201ENST00000609881 752 ntBASIC14□□□□□ -0.17
CLN8Q9UBY8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14□□□□□ -0.17
CLN8Q9UBY8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLN8Q9UBY8 AL162727.3-201ENST00000635661 2787 ntBASIC14□□□□□ -0.17
CLN8Q9UBY8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14□□□□□ -0.17
CLN8Q9UBY8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
CLN8Q9UBY8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN8Q9UBY8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 AL645728.1-201ENST00000366221 2101 ntBASIC13.99□□□□□ -0.17
CLN8Q9UBY8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 AC131009.4-201ENST00000624048 1740 ntBASIC13.99□□□□□ -0.17
CLN8Q9UBY8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 AC211486.1-202ENST00000416371 468 ntBASIC13.99□□□□□ -0.17
CLN8Q9UBY8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 HTR5BP-201ENST00000430851 1154 ntBASIC13.99□□□□□ -0.17
CLN8Q9UBY8 FAM58CP-201ENST00000435741 640 ntBASIC13.99□□□□□ -0.17
CLN8Q9UBY8 AC211476.1-201ENST00000503899 468 ntBASIC13.99□□□□□ -0.17
CLN8Q9UBY8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms