Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 MIR1908-201ENST00000410394 80 ntBASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 BRI3BPP1-201ENST00000594224 787 ntBASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 AL603756.1-201ENST00000606511 2163 ntBASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.28■■□□□ 1.32
SLC52A1Q9NWF4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 AL691432.1-201ENST00000596308 1422 ntBASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 CTBP2P5-201ENST00000454986 1264 ntBASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 APRT-204ENST00000563655 709 ntTSL 5 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 AC133539.2-201ENST00000604757 467 ntBASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 MIR6869-201ENST00000619434 62 ntBASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 TUBB1P2-201ENST00000422712 1306 ntBASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 TUBB1P1-201ENST00000503144 1300 ntBASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC52A1Q9NWF4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.31
SLC52A1Q9NWF4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 NEFHP1-201ENST00000412845 2629 ntBASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 KLF2P4-201ENST00000451959 1225 ntBASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SLC52A1Q9NWF4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 AL133338.1-201ENST00000565695 1517 ntBASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms