Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.06■□□□□ 0
CHD8Q9HCK8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.06■□□□□ 0
CHD8Q9HCK8 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.06■□□□□ 0
CHD8Q9HCK8 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.06■□□□□ 0
CHD8Q9HCK8 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.06■□□□□ 0
CHD8Q9HCK8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.06■□□□□ 0
CHD8Q9HCK8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CHD8Q9HCK8 MPDU1-223ENST00000582151 728 ntBASIC15.06■□□□□ 0
CHD8Q9HCK8 AL133499.1-201ENST00000596207 608 ntBASIC15.06■□□□□ 0
CHD8Q9HCK8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 LINC01115-203ENST00000606068 577 ntBASIC15.06■□□□□ 0
CHD8Q9HCK8 AL451050.2-201ENST00000606967 682 ntBASIC15.06■□□□□ 0
CHD8Q9HCK8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.06■□□□□ 0
CHD8Q9HCK8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.06■□□□□ 0
CHD8Q9HCK8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.06■□□□□ 0
CHD8Q9HCK8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHD8Q9HCK8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.05■□□□□ 0
CHD8Q9HCK8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
CHD8Q9HCK8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHD8Q9HCK8 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.05■□□□□ 0
CHD8Q9HCK8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.05■□□□□ 0
CHD8Q9HCK8 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.05■□□□□ 0
CHD8Q9HCK8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.05■□□□□ 0
CHD8Q9HCK8 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.05■□□□□ 0
CHD8Q9HCK8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.05■□□□□ 0
CHD8Q9HCK8 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.05■□□□□ 0
CHD8Q9HCK8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.05■□□□□ 0
CHD8Q9HCK8 NPM1P43-201ENST00000558669 786 ntBASIC15.05■□□□□ 0
CHD8Q9HCK8 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CHD8Q9HCK8 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
CHD8Q9HCK8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.05■□□□□ 0
CHD8Q9HCK8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.05■□□□□ 0
CHD8Q9HCK8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CHD8Q9HCK8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.05■□□□□ 0
CHD8Q9HCK8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHD8Q9HCK8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHD8Q9HCK8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.05■□□□□ -0
CHD8Q9HCK8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.05■□□□□ -0
CHD8Q9HCK8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.05■□□□□ -0
CHD8Q9HCK8 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.05■□□□□ -0
CHD8Q9HCK8 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHD8Q9HCK8 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.05■□□□□ -0
CHD8Q9HCK8 RPL13P2-201ENST00000440687 659 ntBASIC15.05■□□□□ -0
CHD8Q9HCK8 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC15.05■□□□□ -0
CHD8Q9HCK8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHD8Q9HCK8 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.05■□□□□ -0
CHD8Q9HCK8 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.05■□□□□ -0
CHD8Q9HCK8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHD8Q9HCK8 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.05■□□□□ -0
CHD8Q9HCK8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.05■□□□□ -0
CHD8Q9HCK8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CHD8Q9HCK8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.05■□□□□ -0
CHD8Q9HCK8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CHD8Q9HCK8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHD8Q9HCK8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHD8Q9HCK8 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHD8Q9HCK8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
CHD8Q9HCK8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.05■□□□□ -0
CHD8Q9HCK8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.05■□□□□ -0
CHD8Q9HCK8 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.05■□□□□ -0
CHD8Q9HCK8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.04■□□□□ -0
CHD8Q9HCK8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.04■□□□□ -0
CHD8Q9HCK8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.04■□□□□ -0
CHD8Q9HCK8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.04■□□□□ -0
CHD8Q9HCK8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CHD8Q9HCK8 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.04■□□□□ -0
CHD8Q9HCK8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.04■□□□□ -0
CHD8Q9HCK8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.04■□□□□ -0
CHD8Q9HCK8 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.04■□□□□ -0
CHD8Q9HCK8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.04■□□□□ -0
CHD8Q9HCK8 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.04■□□□□ -0
CHD8Q9HCK8 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.04■□□□□ -0
CHD8Q9HCK8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD8Q9HCK8 FRMD8P1-201ENST00000440433 1524 ntBASIC15.04■□□□□ -0
CHD8Q9HCK8 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.03■□□□□ -0
CHD8Q9HCK8 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CHD8Q9HCK8 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.03■□□□□ -0
CHD8Q9HCK8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.03■□□□□ -0
CHD8Q9HCK8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.03■□□□□ -0
CHD8Q9HCK8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CHD8Q9HCK8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.03■□□□□ -0
CHD8Q9HCK8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms