Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 AL353718.1-201ENST00000451028 517 ntBASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 AC096734.2-201ENST00000562054 433 ntBASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC24.8■■□□□ 1.56
SCAF1Q9H7N4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 SDHAP2-201ENST00000455183 2001 ntBASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 NME2P1-201ENST00000426182 414 ntBASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 AC008507.2-201ENST00000588402 1176 ntBASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 AC084782.3-201ENST00000612282 578 ntBASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 AC010654.1-201ENST00000615722 808 ntBASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 PMPCAP1-201ENST00000508114 1576 ntBASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF1Q9H7N4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 PAICSP2-201ENST00000429118 1150 ntBASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 IGHV3-42-201ENST00000520410 361 ntBASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 IGHV3-71-201ENST00000523324 359 ntBASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 AL390754.1-201ENST00000619088 582 ntBASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 REXO1L3P-201ENST00000622202 1288 ntBASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 AC073592.4-201ENST00000623827 446 ntBASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SCAF1Q9H7N4 AC104640.1-201ENST00000562617 2109 ntBASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 PRYP5-201ENST00000451909 266 ntBASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 RN7SL692P-201ENST00000464677 288 ntBASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 AC025048.6-201ENST00000634326 1161 ntBASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCAF1Q9H7N4 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms