Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
FOXP3Q9BZS1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
FOXP3Q9BZS1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXP3Q9BZS1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXP3Q9BZS1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
FOXP3Q9BZS1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXP3Q9BZS1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXP3Q9BZS1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXP3Q9BZS1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
FOXP3Q9BZS1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 NCF1C-201ENST00000438382 1427 ntBASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 FAM197Y3-203ENST00000618346 717 ntBASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 AC107918.4-202ENST00000641623 219 ntBASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 AC104640.1-201ENST00000562617 2109 ntBASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXP3Q9BZS1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 AC092183.1-201ENST00000469884 875 ntBASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 AC091167.2-201ENST00000579581 588 ntBASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXP3Q9BZS1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms