Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRRC3Q9BY71 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3Q9BY71 AC084018.2-201ENST00000613093 2607 ntBASIC17.15■□□□□ 0.34
LRRC3Q9BY71 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
LRRC3Q9BY71 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
LRRC3Q9BY71 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3Q9BY71 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3Q9BY71 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRRC3Q9BY71 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
LRRC3Q9BY71 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 AC106820.2-201ENST00000563775 3264 ntBASIC17.14■□□□□ 0.33
LRRC3Q9BY71 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 PIN1P1-201ENST00000412108 996 ntBASIC17.14■□□□□ 0.33
LRRC3Q9BY71 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 AC005034.1-201ENST00000426657 489 ntBASIC17.14■□□□□ 0.33
LRRC3Q9BY71 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 AC020765.3-201ENST00000613051 740 ntBASIC17.14■□□□□ 0.33
LRRC3Q9BY71 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 AL589702.1-201ENST00000641229 1509 ntBASIC17.14■□□□□ 0.33
LRRC3Q9BY71 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 GPAA1P2-202ENST00000606848 1787 ntBASIC17.14■□□□□ 0.33
LRRC3Q9BY71 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC3Q9BY71 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 GGT4P-201ENST00000623672 1708 ntBASIC17.13■□□□□ 0.33
LRRC3Q9BY71 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 AC061975.2-201ENST00000581722 295 ntBASIC17.13■□□□□ 0.33
LRRC3Q9BY71 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 AL662799.1-202ENST00000614205 422 ntBASIC17.13■□□□□ 0.33
LRRC3Q9BY71 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 AC063926.2-201ENST00000623766 1308 ntBASIC17.13■□□□□ 0.33
LRRC3Q9BY71 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 AC022211.2-201ENST00000585075 2527 ntBASIC17.13■□□□□ 0.33
LRRC3Q9BY71 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRRC3Q9BY71 AC124067.4-201ENST00000519691 2379 ntBASIC17.13■□□□□ 0.33
LRRC3Q9BY71 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms