Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 AL023775.1-201ENST00000454907 1746 ntBASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 LINC01711-201ENST00000598340 967 ntBASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
NDUFAF3Q9BU61 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 REXO1L2P-201ENST00000425429 2069 ntBASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 VENTXP7-201ENST00000475503 772 ntBASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 AC111152.3-201ENST00000569699 673 ntBASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 AC005332.3-201ENST00000589904 676 ntBASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 GPR32P1-201ENST00000601788 811 ntBASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 IGHV3-41-201ENST00000613121 348 ntBASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms