Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 AC068418.2-201ENST00000577309 3703 ntBASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 AC006504.4-201ENST00000592118 1568 ntBASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 ELK2BP-201ENST00000415014 1224 ntBASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 MTDHP4-201ENST00000600287 670 ntBASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 AC004706.3-202ENST00000621574 984 ntBASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.98□□□□□ -0.17
HDHD3Q9BSH5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 KRT18P35-201ENST00000510488 1269 ntBASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 AC091167.2-201ENST00000579581 588 ntBASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 AC091076.1-201ENST00000610741 619 ntBASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 AL355877.3-201ENST00000622820 899 ntBASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms