Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 ABCD1P5-201ENST00000445663 754 ntBASIC16.13■□□□□ 0.17
EBF4Q9BQW3 TOB2P1-201ENST00000469761 992 ntBASIC16.13■□□□□ 0.17
EBF4Q9BQW3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 SSR4P1-203ENST00000599569 2260 ntBASIC16.13■□□□□ 0.17
EBF4Q9BQW3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EBF4Q9BQW3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 AC099063.4-201ENST00000641099 1602 ntBASIC16.12■□□□□ 0.17
EBF4Q9BQW3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 AC131009.4-201ENST00000624048 1740 ntBASIC16.12■□□□□ 0.17
EBF4Q9BQW3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 DRAXINP1-201ENST00000437611 948 ntBASIC16.12■□□□□ 0.17
EBF4Q9BQW3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 PAWRP1-201ENST00000451083 565 ntBASIC16.12■□□□□ 0.17
EBF4Q9BQW3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 REXO1L3P-201ENST00000622202 1288 ntBASIC16.12■□□□□ 0.17
EBF4Q9BQW3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 AC023157.3-201ENST00000619086 2088 ntBASIC16.12■□□□□ 0.17
EBF4Q9BQW3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF4Q9BQW3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.11■□□□□ 0.17
EBF4Q9BQW3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms