Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.63□□□□□ -0.07
SPENQ96T58 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SPENQ96T58 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SPENQ96T58 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SPENQ96T58 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.63□□□□□ -0.07
SPENQ96T58 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SPENQ96T58 AC009542.2-202ENST00000619004 1067 ntBASIC14.63□□□□□ -0.07
SPENQ96T58 AC004461.2-201ENST00000629517 803 ntBASIC14.63□□□□□ -0.07
SPENQ96T58 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.63□□□□□ -0.07
SPENQ96T58 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.63□□□□□ -0.07
SPENQ96T58 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SPENQ96T58 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
SPENQ96T58 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.63□□□□□ -0.07
SPENQ96T58 AC022211.2-201ENST00000585075 2527 ntBASIC14.63□□□□□ -0.07
SPENQ96T58 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
SPENQ96T58 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
SPENQ96T58 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.63□□□□□ -0.07
SPENQ96T58 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SPENQ96T58 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.63□□□□□ -0.07
SPENQ96T58 HAUS4P1-201ENST00000406739 1145 ntBASIC14.63□□□□□ -0.07
SPENQ96T58 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.63□□□□□ -0.07
SPENQ96T58 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SPENQ96T58 KRT18P34-201ENST00000488218 1270 ntBASIC14.63□□□□□ -0.07
SPENQ96T58 AC104989.1-201ENST00000519711 778 ntBASIC14.63□□□□□ -0.07
SPENQ96T58 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.63□□□□□ -0.07
SPENQ96T58 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPENQ96T58 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
SPENQ96T58 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 AC098859.1-201ENST00000502915 1238 ntBASIC14.62□□□□□ -0.07
SPENQ96T58 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SPENQ96T58 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.62□□□□□ -0.07
SPENQ96T58 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.62□□□□□ -0.07
SPENQ96T58 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.62□□□□□ -0.07
SPENQ96T58 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.62□□□□□ -0.07
SPENQ96T58 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.62□□□□□ -0.07
SPENQ96T58 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.62□□□□□ -0.07
SPENQ96T58 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.62□□□□□ -0.07
SPENQ96T58 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 AC021097.1-201ENST00000607902 574 ntBASIC14.62□□□□□ -0.07
SPENQ96T58 CLK3P2-201ENST00000427566 1453 ntBASIC14.62□□□□□ -0.07
SPENQ96T58 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
SPENQ96T58 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.62□□□□□ -0.07
SPENQ96T58 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SPENQ96T58 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
SPENQ96T58 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.62□□□□□ -0.07
SPENQ96T58 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 LINC02012-201ENST00000608206 1725 ntBASIC14.62□□□□□ -0.07
SPENQ96T58 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.62□□□□□ -0.07
SPENQ96T58 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.62□□□□□ -0.07
SPENQ96T58 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SPENQ96T58 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPENQ96T58 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SPENQ96T58 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.61□□□□□ -0.07
SPENQ96T58 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SPENQ96T58 AC079328.2-201ENST00000561241 3354 ntBASIC14.61□□□□□ -0.07
SPENQ96T58 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPENQ96T58 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPENQ96T58 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPENQ96T58 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SPENQ96T58 CTBP2P5-201ENST00000454986 1264 ntBASIC14.61□□□□□ -0.07
SPENQ96T58 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.61□□□□□ -0.07
SPENQ96T58 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.61□□□□□ -0.07
SPENQ96T58 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.61□□□□□ -0.07
SPENQ96T58 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.61□□□□□ -0.07
SPENQ96T58 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SPENQ96T58 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.61□□□□□ -0.07
SPENQ96T58 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SPENQ96T58 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.61□□□□□ -0.07
SPENQ96T58 FO681548.1-201ENST00000455617 1132 ntBASIC14.61□□□□□ -0.07
SPENQ96T58 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.61□□□□□ -0.07
SPENQ96T58 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.61□□□□□ -0.07
SPENQ96T58 AC074044.1-201ENST00000609673 707 ntBASIC14.61□□□□□ -0.07
SPENQ96T58 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.61□□□□□ -0.07
SPENQ96T58 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms