Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 AC099398.1-201ENST00000567919 2776 ntBASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 MTND6P24-201ENST00000440466 518 ntBASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 AC105021.1-202ENST00000570572 669 ntBASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 AC008738.7-201ENST00000609744 511 ntBASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 AC022211.2-201ENST00000585075 2527 ntBASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 PKD1P1-201ENST00000458669 6805 ntBASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNGAP1Q96PV0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 KRT8P39-201ENST00000396270 1433 ntBASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 RNA5SP410-201ENST00000516285 106 ntBASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 ZNF890P-202ENST00000530367 1156 ntBASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 AL133215.2-201ENST00000609242 977 ntBASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGAP1Q96PV0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 AL080243.2-201ENST00000418783 582 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms