Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GAFA1Q96PS6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 AC027307.2-201ENST00000591252 911 ntBASIC13.7□□□□□ -0.22
GAFA1Q96PS6 AC008267.7-201ENST00000624570 1194 ntBASIC13.7□□□□□ -0.22
GAFA1Q96PS6 AC105339.1-204ENST00000636249 355 ntBASIC13.7□□□□□ -0.22
GAFA1Q96PS6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 AC006449.5-201ENST00000610658 2098 ntBASIC13.7□□□□□ -0.22
GAFA1Q96PS6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GAFA1Q96PS6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms