Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 AC004461.1-201ENST00000412461 403 ntBASIC18.66■□□□□ 0.58
TNFRSF25Q93038 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 AC098859.1-201ENST00000502915 1238 ntBASIC18.66■□□□□ 0.58
TNFRSF25Q93038 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 KRT8P23-201ENST00000560090 1207 ntBASIC18.66■□□□□ 0.58
TNFRSF25Q93038 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 AC008677.1-201ENST00000519230 1561 ntBASIC18.66■□□□□ 0.58
TNFRSF25Q93038 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF25Q93038 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 AC061975.2-201ENST00000581722 295 ntBASIC18.65■□□□□ 0.58
TNFRSF25Q93038 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 SPTSSB-204ENST00000617024 1292 ntBASIC18.65■□□□□ 0.58
TNFRSF25Q93038 AC055717.3-201ENST00000622967 595 ntBASIC18.65■□□□□ 0.58
TNFRSF25Q93038 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 BCL2-203ENST00000589955 5011 ntBASIC18.65■□□□□ 0.58
TNFRSF25Q93038 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF25Q93038 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.64■□□□□ 0.58
TNFRSF25Q93038 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.64■□□□□ 0.58
TNFRSF25Q93038 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 FAM58DP-201ENST00000428076 619 ntBASIC18.64■□□□□ 0.57
TNFRSF25Q93038 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 AL592309.1-201ENST00000443127 649 ntBASIC18.64■□□□□ 0.57
TNFRSF25Q93038 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms