Protein–RNA interactions for Protein: Q92973

TNPO1, Transportin-1, humanhuman

Known RBP Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1Q92973 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TNPO1Q92973 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TNPO1Q92973 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNPO1Q92973 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.7■□□□□ 0.74
TNPO1Q92973 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNPO1Q92973 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TNPO1Q92973 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.7■□□□□ 0.74
TNPO1Q92973 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.7■□□□□ 0.74
TNPO1Q92973 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.7■□□□□ 0.74
TNPO1Q92973 MTDHP4-201ENST00000600287 670 ntBASIC19.7■□□□□ 0.74
TNPO1Q92973 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
TNPO1Q92973 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TNPO1Q92973 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.7■□□□□ 0.74
TNPO1Q92973 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.7■□□□□ 0.74
TNPO1Q92973 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.7■□□□□ 0.74
TNPO1Q92973 AF228730.7-201ENST00000641842 219 ntBASIC19.7■□□□□ 0.74
TNPO1Q92973 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.7■□□□□ 0.74
TNPO1Q92973 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.7■□□□□ 0.74
TNPO1Q92973 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.7■□□□□ 0.74
TNPO1Q92973 AC006449.6-201ENST00000612330 2296 ntBASIC19.7■□□□□ 0.74
TNPO1Q92973 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNPO1Q92973 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNPO1Q92973 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNPO1Q92973 AP005117.1-202ENST00000581724 1908 ntBASIC19.7■□□□□ 0.74
TNPO1Q92973 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNPO1Q92973 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TNPO1Q92973 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.7■□□□□ 0.74
TNPO1Q92973 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TNPO1Q92973 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNPO1Q92973 AL021920.2-201ENST00000624828 1351 ntBASIC19.7■□□□□ 0.74
TNPO1Q92973 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 AC006277.1-201ENST00000624348 1610 ntBASIC19.69■□□□□ 0.74
TNPO1Q92973 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.69■□□□□ 0.74
TNPO1Q92973 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TNPO1Q92973 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
TNPO1Q92973 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.69■□□□□ 0.74
TNPO1Q92973 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.69■□□□□ 0.74
TNPO1Q92973 AC106730.1-201ENST00000566722 1090 ntBASIC19.69■□□□□ 0.74
TNPO1Q92973 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.69■□□□□ 0.74
TNPO1Q92973 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.69■□□□□ 0.74
TNPO1Q92973 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TNPO1Q92973 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
TNPO1Q92973 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.69■□□□□ 0.74
TNPO1Q92973 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
TNPO1Q92973 AL671710.1-201ENST00000610245 2349 ntBASIC19.69■□□□□ 0.74
TNPO1Q92973 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNPO1Q92973 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.69■□□□□ 0.74
TNPO1Q92973 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.69■□□□□ 0.74
TNPO1Q92973 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.68■□□□□ 0.74
TNPO1Q92973 LINC02228-204ENST00000642115 2962 ntBASIC19.68■□□□□ 0.74
TNPO1Q92973 SIGLEC16-201ENST00000599858 1437 ntBASIC19.68■□□□□ 0.74
TNPO1Q92973 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
TNPO1Q92973 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.68■□□□□ 0.74
TNPO1Q92973 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TNPO1Q92973 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TNPO1Q92973 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.68■□□□□ 0.74
TNPO1Q92973 RPS2P1-201ENST00000434010 821 ntBASIC19.68■□□□□ 0.74
TNPO1Q92973 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.68■□□□□ 0.74
TNPO1Q92973 HNRNPDP1-201ENST00000439535 754 ntBASIC19.68■□□□□ 0.74
TNPO1Q92973 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.68■□□□□ 0.74
TNPO1Q92973 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.68■□□□□ 0.74
TNPO1Q92973 AC073592.4-201ENST00000623827 446 ntBASIC19.68■□□□□ 0.74
TNPO1Q92973 AC116407.3-201ENST00000623905 1129 ntBASIC19.68■□□□□ 0.74
TNPO1Q92973 AC107918.4-202ENST00000641623 219 ntBASIC19.68■□□□□ 0.74
TNPO1Q92973 AL139011.1-202ENST00000642063 584 ntBASIC19.68■□□□□ 0.74
TNPO1Q92973 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.68■□□□□ 0.74
TNPO1Q92973 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.68■□□□□ 0.74
TNPO1Q92973 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.68■□□□□ 0.74
TNPO1Q92973 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.68■□□□□ 0.74
TNPO1Q92973 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNPO1Q92973 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TNPO1Q92973 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms