Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 PGM5P2-202ENST00000637225 1043 ntBASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 AL592424.1-201ENST00000563624 1536 ntBASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 AC129492.6-201ENST00000611383 1305 ntBASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC44A1Q8WWI5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 AC016027.1-202ENST00000607927 1699 ntBASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 AC073347.1-201ENST00000421633 2643 ntBASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 AC025062.2-201ENST00000605477 670 ntBASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 AC008608.2-201ENST00000606089 416 ntBASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms