Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 ALOX12P2-203ENST00000570921 1945 ntBASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 TSSK5P-201ENST00000423978 907 ntBASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 AC241585.1-201ENST00000433527 519 ntBASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 MTND6P24-201ENST00000440466 518 ntBASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 MIR4321-201ENST00000592276 80 ntBASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 AC092364.2-202ENST00000597012 1073 ntBASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 AL365330.1-201ENST00000607459 531 ntBASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 AL592424.1-201ENST00000563624 1536 ntBASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 AC100757.3-201ENST00000622361 1406 ntBASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 INGX-202ENST00000489074 768 ntBASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD1Q8NHV4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 AC005052.1-201ENST00000625181 2492 ntBASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 RPL37AP1-201ENST00000412502 279 ntBASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 AC004890.2-204ENST00000481968 304 ntBASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 MIR3197-201ENST00000582241 73 ntBASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 AL589739.1-201ENST00000607720 493 ntBASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 CETN4P-206ENST00000642099 2168 ntBASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NEDD1Q8NHV4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms