Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 AC092919.2-201ENST00000623631 1645 ntBASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 AL022342.1-201ENST00000400363 863 ntBASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 KRT18P58-201ENST00000527480 1120 ntBASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM35BQ8NCS4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 AC005622.1-201ENST00000636801 1703 ntBASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 AC002056.1-201ENST00000395613 760 ntBASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 MIR940-201ENST00000401276 94 ntBASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 AP002472.1-201ENST00000577490 586 ntBASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 AL078644.1-201ENST00000609881 752 ntBASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 AL161645.1-201ENST00000622716 1255 ntBASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms