Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 AC108751.1-201ENST00000490852 363 ntBASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 RNA5SP419-201ENST00000515908 135 ntBASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 MIR3909-201ENST00000579518 119 ntBASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 AC093909.1-201ENST00000504731 1122 ntBASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 AL662844.1-201ENST00000546340 181 ntBASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 AL049840.3-201ENST00000602669 611 ntBASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 AC116407.3-201ENST00000623905 1129 ntBASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 AL645728.2-201ENST00000641974 660 ntBASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSMEM1Q8N8F7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms