Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 AL589702.1-201ENST00000641229 1509 ntBASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
TRAM1L1Q8N609 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 TSEN15P1-201ENST00000423257 515 ntBASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAM1L1Q8N609 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 AC005052.1-201ENST00000625181 2492 ntBASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAM1L1Q8N609 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 GPS2P2-201ENST00000430745 888 ntBASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 RBPMS2P1-201ENST00000437762 623 ntBASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms