Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC008677.1-201ENST00000519230 1561 ntBASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 AC025678.2-201ENST00000562061 970 ntBASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 AC061975.2-201ENST00000581722 295 ntBASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ARHGEF39Q8N4T4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.52■□□□□ 0.07
ARHGEF39Q8N4T4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
ARHGEF39Q8N4T4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ARHGEF39Q8N4T4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ARHGEF39Q8N4T4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.52■□□□□ 0.07
ARHGEF39Q8N4T4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ARHGEF39Q8N4T4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ARHGEF39Q8N4T4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ARHGEF39Q8N4T4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 AC004449.1-201ENST00000564240 433 ntBASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 AC027796.2-201ENST00000575326 344 ntBASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ARHGEF39Q8N4T4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 BANF1P1-201ENST00000553684 263 ntBASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARHGEF39Q8N4T4 AC018529.1-201ENST00000613063 361 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms