Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 ALG1L8P-201ENST00000533887 760 ntBASIC17.93■□□□□ 0.46
VPS52Q8N1B4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 RN7SL204P-201ENST00000582831 262 ntBASIC17.93■□□□□ 0.46
VPS52Q8N1B4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 AC027307.2-201ENST00000591252 911 ntBASIC17.93■□□□□ 0.46
VPS52Q8N1B4 MIR6080-201ENST00000617359 66 ntBASIC17.93■□□□□ 0.46
VPS52Q8N1B4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 TERF1P3-201ENST00000505638 1227 ntBASIC17.92■□□□□ 0.46
VPS52Q8N1B4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 AP000842.3-202ENST00000569238 1080 ntBASIC17.92■□□□□ 0.46
VPS52Q8N1B4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 AP001350.2-201ENST00000625104 1094 ntBASIC17.92■□□□□ 0.46
VPS52Q8N1B4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 AC008894.3-201ENST00000624324 3103 ntBASIC17.92■□□□□ 0.46
VPS52Q8N1B4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 AC018695.7-201ENST00000624587 2492 ntBASIC17.92■□□□□ 0.46
VPS52Q8N1B4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS52Q8N1B4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 MIR661-201ENST00000384842 89 ntBASIC17.91■□□□□ 0.46
VPS52Q8N1B4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 AC015922.1-201ENST00000421102 1152 ntBASIC17.91■□□□□ 0.46
VPS52Q8N1B4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.91■□□□□ 0.46
VPS52Q8N1B4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 AC069120.2-201ENST00000524091 540 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms