Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
UBR1Q8IWV7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
UBR1Q8IWV7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
UBR1Q8IWV7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.98■■□□□ 1.27
UBR1Q8IWV7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 ELK2AP-201ENST00000392510 1007 ntBASIC22.97■■□□□ 1.27
UBR1Q8IWV7 C1QBPP1-201ENST00000400117 770 ntBASIC22.97■■□□□ 1.27
UBR1Q8IWV7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 AC022137.2-201ENST00000503482 481 ntBASIC22.97■■□□□ 1.27
UBR1Q8IWV7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 AC106872.11-201ENST00000605838 421 ntBASIC22.97■■□□□ 1.27
UBR1Q8IWV7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 RETN-203ENST00000629642 400 ntTSL 5 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 GGT3P-204ENST00000453783 1664 ntBASIC22.97■■□□□ 1.27
UBR1Q8IWV7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
UBR1Q8IWV7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 RPL13AP25-201ENST00000484130 612 ntBASIC22.96■■□□□ 1.27
UBR1Q8IWV7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 RN7SL190P-201ENST00000582519 257 ntBASIC22.96■■□□□ 1.27
UBR1Q8IWV7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 AC008687.7-202ENST00000637404 953 ntBASIC22.96■■□□□ 1.27
UBR1Q8IWV7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
UBR1Q8IWV7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
UBR1Q8IWV7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 SLED1-202ENST00000512051 380 ntBASIC22.95■■□□□ 1.26
UBR1Q8IWV7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 COG4-212ENST00000564653 590 ntTSL 5 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
UBR1Q8IWV7 AC134312.5-201ENST00000568031 1313 ntBASIC22.94■■□□□ 1.26
UBR1Q8IWV7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms