Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC83Q8IWF9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC83Q8IWF9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC83Q8IWF9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC83Q8IWF9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC83Q8IWF9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC83Q8IWF9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC83Q8IWF9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC83Q8IWF9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC83Q8IWF9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 RPS2P28-201ENST00000314255 741 ntBASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 AC104692.2-201ENST00000603054 253 ntBASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC83Q8IWF9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 AC004870.1-201ENST00000315132 882 ntBASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 AC098831.1-202ENST00000438821 336 ntBASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 AC108751.1-201ENST00000490852 363 ntBASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 AP002469.2-201ENST00000531724 424 ntBASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 AC105917.1-201ENST00000506637 2539 ntBASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC83Q8IWF9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms