Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PRAL-201ENST00000624952 3286 ntBASIC15.03■□□□□ -0
CROCCP3Q8IVE0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 COX5BP2-201ENST00000392354 334 ntBASIC15.02■□□□□ -0
CROCCP3Q8IVE0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.02■□□□□ -0
CROCCP3Q8IVE0 GGT4P-201ENST00000623672 1708 ntBASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 AC016027.1-202ENST00000607927 1699 ntBASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.02□□□□□ -0.01
CROCCP3Q8IVE0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 AC136621.1-201ENST00000624017 2304 ntBASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 AC006449.6-201ENST00000612330 2296 ntBASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 AC020658.6-201ENST00000623564 1870 ntBASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.01□□□□□ -0.01
CROCCP3Q8IVE0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms