Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 MIR4515-201ENST00000584082 81 ntBASIC15.3■□□□□ 0.04
VRK2Q86Y07 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.3■□□□□ 0.04
VRK2Q86Y07 AL365203.3-201ENST00000609742 2057 ntBASIC15.29■□□□□ 0.04
VRK2Q86Y07 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 AC022188.1-201ENST00000620960 1664 ntBASIC15.29■□□□□ 0.04
VRK2Q86Y07 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 HMGA1P7-201ENST00000406908 502 ntBASIC15.29■□□□□ 0.04
VRK2Q86Y07 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 PRSS29P-201ENST00000440800 595 ntBASIC15.29■□□□□ 0.04
VRK2Q86Y07 POU5F1P6-201ENST00000466990 990 ntBASIC15.29■□□□□ 0.04
VRK2Q86Y07 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.29■□□□□ 0.04
VRK2Q86Y07 RNA5SP419-201ENST00000515908 135 ntBASIC15.29■□□□□ 0.04
VRK2Q86Y07 UNC93B6-202ENST00000528242 690 ntBASIC15.29■□□□□ 0.04
VRK2Q86Y07 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 KRT126P-201ENST00000549467 1181 ntBASIC15.29■□□□□ 0.04
VRK2Q86Y07 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 AC024909.3-201ENST00000611513 2257 ntBASIC15.29■□□□□ 0.04
VRK2Q86Y07 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK2Q86Y07 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VRK2Q86Y07 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 AL513480.1-201ENST00000451731 511 ntBASIC15.28■□□□□ 0.04
VRK2Q86Y07 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 AC020765.3-201ENST00000613051 740 ntBASIC15.28■□□□□ 0.04
VRK2Q86Y07 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms