Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 PRYP6-201ENST00000514804 343 ntBASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 AC140878.1-201ENST00000565277 250 ntBASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 MIR3197-201ENST00000582241 73 ntBASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 AL390955.2-201ENST00000603032 514 ntBASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3F3CQ6NXT2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AL596257.1-201ENST00000641463 2694 ntBASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AC055876.3-201ENST00000431496 288 ntBASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AC138649.4-201ENST00000612222 287 ntBASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AP3S2-216ENST00000617003 1561 ntBASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AC073439.1-201ENST00000624121 1774 ntBASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 AC060834.1-201ENST00000443027 2032 ntBASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
H3F3CQ6NXT2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms