Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 AC007686.3-201ENST00000619017 3487 ntBASIC15.62■□□□□ 0.09
LPCAT4Q643R3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 KRT8P49-201ENST00000604166 1432 ntBASIC15.61■□□□□ 0.09
LPCAT4Q643R3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 AL353593.2-201ENST00000602529 1483 ntBASIC15.61■□□□□ 0.09
LPCAT4Q643R3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 AC034232.1-201ENST00000506026 1064 ntBASIC15.61■□□□□ 0.09
LPCAT4Q643R3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 GCSHP2-201ENST00000560971 527 ntBASIC15.61■□□□□ 0.09
LPCAT4Q643R3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LPCAT4Q643R3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.6■□□□□ 0.09
LPCAT4Q643R3 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.6■□□□□ 0.09
LPCAT4Q643R3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 Z99916.2-201ENST00000604037 246 ntBASIC15.6■□□□□ 0.09
LPCAT4Q643R3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms