Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
NKX6-1P78426 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
NKX6-1P78426 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.61□□□□□ -0.07
NKX6-1P78426 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX6-1P78426 INGX-202ENST00000489074 768 ntBASIC14.61□□□□□ -0.07
NKX6-1P78426 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.61□□□□□ -0.07
NKX6-1P78426 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX6-1P78426 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX6-1P78426 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.61□□□□□ -0.07
NKX6-1P78426 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX6-1P78426 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX6-1P78426 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX6-1P78426 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NKX6-1P78426 AC063926.2-201ENST00000623766 1308 ntBASIC14.61□□□□□ -0.07
NKX6-1P78426 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
NKX6-1P78426 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX6-1P78426 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.6□□□□□ -0.07
NKX6-1P78426 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NKX6-1P78426 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NKX6-1P78426 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NKX6-1P78426 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.6□□□□□ -0.07
NKX6-1P78426 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NKX6-1P78426 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX6-1P78426 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NKX6-1P78426 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.6□□□□□ -0.07
NKX6-1P78426 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX6-1P78426 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX6-1P78426 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NKX6-1P78426 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX6-1P78426 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX6-1P78426 AC093520.2-201ENST00000561830 333 ntBASIC14.6□□□□□ -0.07
NKX6-1P78426 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.6□□□□□ -0.07
NKX6-1P78426 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX6-1P78426 AL035252.4-201ENST00000624174 288 ntBASIC14.6□□□□□ -0.07
NKX6-1P78426 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX6-1P78426 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX6-1P78426 AF228730.6-201ENST00000641497 218 ntBASIC14.6□□□□□ -0.07
NKX6-1P78426 AC084121.3-201ENST00000641716 218 ntBASIC14.6□□□□□ -0.07
NKX6-1P78426 AC105233.6-201ENST00000642093 218 ntBASIC14.6□□□□□ -0.07
NKX6-1P78426 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
NKX6-1P78426 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX6-1P78426 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX6-1P78426 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX6-1P78426 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX6-1P78426 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NKX6-1P78426 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NKX6-1P78426 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.59□□□□□ -0.07
NKX6-1P78426 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.59□□□□□ -0.07
NKX6-1P78426 AL513480.1-201ENST00000451731 511 ntBASIC14.59□□□□□ -0.07
NKX6-1P78426 TIMM8BP1-201ENST00000452384 211 ntBASIC14.59□□□□□ -0.07
NKX6-1P78426 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX6-1P78426 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.59□□□□□ -0.07
NKX6-1P78426 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms